Jessica Scholey, PhD, MSc

Asst Professor of Clin HCOMP

Radiation Oncology

Dr. Jess Scholey is an Assistant Professor, Physics Director of the MRI Simulation Program, and Physics Lead of the Proton Ocular Program in the Department of Radiation Oncology at the University of California, San Francisco. She received her BA in Physics from UC Berkeley and went on to receive her MSc and clinical residency training in medical physics from The University of Pennsylvania. Upon completion of her clinical training and ABR certification, she received her PhD from the Joint UC Berkeley-UCSF Bioengineering Program. She joined the faculty in 2017 and focuses on radiation oncology applications of MRI, proton therapy, and deep learning using medical imaging. Dr. Scholey leads the educational curriculum of MRI and proton therapy in the Department of Radiation Oncology and is an active member of the American Association of Physicists in Medicine, International Society for Magnetic Resonance in Medicine, Particle Therapy Co-Operative Group, and the UCSF Center for Intelligent Imaging.

Publications:

Abdominal MR Multitasking for radiotherapy treatment planning: A motion-resolved and multicontrast 3D imaging approach.

Magnetic resonance in medicine

Chen J, Christodoulou AG, Han P, Xiao J, Han F, Hu Z, Wang N, Han H, Ling DC, Chang EL, Feng M, Scholey JE, Cui S, Li D, Yang W, Fan Z

Author Correction: MRI-only based material mass density and relative stopping power estimation via deep learning for proton therapy: a preliminary study.

Scientific reports

Gao Y, Chang CW, Mandava S, Marants R, Scholey JE, Goette M, Lei Y, Mao H, Bradley JD, Liu T, Zhou J, Sudhyadhom A, Yang X

Paired conditional generative adversarial network for highly accelerated liver 4D MRI.

Physics in medicine and biology

Xu D, Miao X, Liu H, Scholey JE, Yang W, Feng M, Ohliger M, Lin H, Lao Y, Yang Y, Sheng K

Linac- and CyberKnife-based MRI-only treatment planning of prostate SBRT using an optimized synthetic CT calibration curve.

Journal of applied clinical medical physics

Scholey J, Nano T, Singhrao K, Mohammad O, Singer L, Larson PEZ, Descovich M

MRI-only based material mass density and relative stopping power estimation via deep learning for proton therapy: a preliminary study.

Scientific reports

Gao Y, Chang CW, Mandava S, Marants R, Scholey JE, Goette M, Lei Y, Mao H, Bradley JD, Liu T, Zhou J, Sudhyadhom A, Yang X

Evaluating the Hounsfield unit assignment and dose differences between CT-based standard and deep learning-based synthetic CT images for MRI-only radiation therapy of the head and neck.

Journal of applied clinical medical physics

Singhrao K, Dugan CL, Calvin C, Pelayo L, Yom SS, Chan JW, Scholey JE, Singer L

Incidental findings and safety events from magnetic resonance imaging simulation for head and neck radiation treatment planning: A single institution experience.

Technical innovations & patient support in radiation oncology

Massachi J, Singer L, Glastonbury C, Scholey J, Singhrao K, Calvin C, Yom SS, Chan JW

End-to-end validation of fiducial tracking accuracy in robotic radiosurgery using MRI-only simulation imaging.

Medical physics

Singhrao K, Zubair M, Nano T, Scholey JE, Descovich M

Predicting the impact of proton beam therapy technology on pulmonary toxicities for locally advanced lung cancer patients enrolled on the Proton Collaborative Group prospective clinical trial.

International journal of radiation oncology, biology, physics

Valdes G, Scholey J, Nano T, Gennatas ED, Mohindra P, Mohammed N, Zeng J, Kotesha RD, Rosen LR, Chang J, Tsai HK, Urbanic JJ, Vargas CE, Yu NY, Ungar LH, Eaton E, Simone CB

Multimodal Imaging-based material mass density estimation for Proton therapy using supervised deep learning.

The British journal of radiology

Chang CW, Marants R, Gao Y, Goette M, Scholey JE, Bradley JD, Liu T, Zhou J, Sudhyadhom A, Yang X

Validation of an MR-based multimodal method for molecular composition and proton stopping power ratio determination usingex vivoanimal tissues and tissue-mimicking phantoms.

Physics in medicine and biology

Marants R, Tattenberg S, Scholey JE, Kaza E, Miao X, Benkert T, Magneson O, Fischer J, Vinas L, Niepel KB, Bortfeld TR, Landry G, Parodi K, Verburg JM, Sudhyadhom A

Contrast-Enhanced Liver Magnetic Resonance Image Synthesis Using Gradient Regularized Multi-Modal Multi-Discrimination Sparse Attention Fusion GAN.

Cancers

Jiao C, Ling D, Bian S, Vassantachart A, Cheng K, Mehta S, Lock D, Zhu Z, Feng M, Thomas H, Scholey JE, Sheng K, Fan Z, Yang W

Finding Resonance: Using MRI to Improve the Care of Oligometastatic Disease.

International journal of radiation oncology, biology, physics

Singer L, Scholey J

Quality Assurance for AI-Based Applications in Radiation Therapy.

Seminars in radiation oncology

Claessens M, Oria CS, Brouwer CL, Ziemer BP, Scholey JE, Lin H, Witztum A, Morin O, Naqa IE, Van Elmpt W, Verellen D

Generation of synthetic megavoltage CT for MRI-only radiotherapy treatment planning using a 3D deep convolutional neural network.

Medical physics

Scholey JE, Rajagopal A, Vasquez EG, Sudhyadhom A, Larson PEZ

Contrast-enhanced 4D-MRI for internal target volume generation in treatment planning for liver tumors.

Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology

Thomas HR, Miao X, Ferguson D, Calvin C, Bhaskar Krishnamurthy U, Anwar M, Feng M, Scholey J

Improved accuracy of relative electron density and proton stopping power ratio through CycleGAN machine learning.

Physics in medicine and biology

Scholey J, Vinas L, Kearney V, Yom S, Larson PEZ, Descovich M, Sudhyadhom A

Improved contrast and noise of megavoltage computed tomography (MVCT) through cycle-consistent generative machine learning.

Medical physics

Vinas L, Scholey J, Descovich M, Kearney V, Sudhyadhom A

Practice Considerations for Proton Beam Radiation Therapy of Uveal Melanoma During the Coronavirus Disease Pandemic: Particle Therapy Co-Operative Group Ocular Experience.

Advances in radiation oncology

Mishra KK, Afshar A, Thariat J, Shih HA, Scholey JE, Daftari IK, Kacperek A, Pica A, Hrbacek J, Dendale R, Mazal A, Heufelder J, Char DH, Sauerwein WAG, Weber DC, Damato BE

Initial Report of Pencil Beam Scanning Proton Therapy for Posthysterectomy Patients With Gynecologic Cancer.

International journal of radiation oncology, biology, physics

Lin LL, Kirk M, Scholey J, Taku N, Kiely JB, White B, Both S

Structural basis for the assembly of the mitotic motor Kinesin-5 into bipolar tetramers.

eLife

Scholey JE, Nithianantham S, Scholey JM, Al-Bassam J

Statistical Learning in Medicine Lab (SLM Lab)

Jessica Scholey, PhD, MSc

Abdominal MR Multitasking for radiotherapy treatment planning: A motion-resolved and multicontrast 3D imaging approach.

Author Correction: MRI-only based material mass density and relative stopping power estimation via deep learning for proton therapy: a preliminary study.

Paired conditional generative adversarial network for highly accelerated liver 4D MRI.

Linac- and CyberKnife-based MRI-only treatment planning of prostate SBRT using an optimized synthetic CT calibration curve.

MRI-only based material mass density and relative stopping power estimation via deep learning for proton therapy: a preliminary study.

Evaluating the Hounsfield unit assignment and dose differences between CT-based standard and deep learning-based synthetic CT images for MRI-only radiation therapy of the head and neck.

Incidental findings and safety events from magnetic resonance imaging simulation for head and neck radiation treatment planning: A single institution experience.

End-to-end validation of fiducial tracking accuracy in robotic radiosurgery using MRI-only simulation imaging.

Predicting the impact of proton beam therapy technology on pulmonary toxicities for locally advanced lung cancer patients enrolled on the Proton Collaborative Group prospective clinical trial.

Multimodal Imaging-based material mass density estimation for Proton therapy using supervised deep learning.

Validation of an MR-based multimodal method for molecular composition and proton stopping power ratio determination usingex vivoanimal tissues and tissue-mimicking phantoms.

Contrast-Enhanced Liver Magnetic Resonance Image Synthesis Using Gradient Regularized Multi-Modal Multi-Discrimination Sparse Attention Fusion GAN.

Finding Resonance: Using MRI to Improve the Care of Oligometastatic Disease.

Quality Assurance for AI-Based Applications in Radiation Therapy.

Generation of synthetic megavoltage CT for MRI-only radiotherapy treatment planning using a 3D deep convolutional neural network.

Contrast-enhanced 4D-MRI for internal target volume generation in treatment planning for liver tumors.

Improved accuracy of relative electron density and proton stopping power ratio through CycleGAN machine learning.

Improved contrast and noise of megavoltage computed tomography (MVCT) through cycle-consistent generative machine learning.

Technical Note: A methodology for improved accuracy in stopping power estimation using MRI and CT.

A Millimeter-scale Single Charged Particle Dosimeter for Cancer Radiotherapy.

Oral isotretinoin and topical retinoid use in a series of young patients with ocular melanoma.

Practice Considerations for Proton Beam Radiation Therapy of Uveal Melanoma During the Coronavirus Disease Pandemic: Particle Therapy Co-Operative Group Ocular Experience.

Initial Report of Pencil Beam Scanning Proton Therapy for Posthysterectomy Patients With Gynecologic Cancer.

Structural basis for the assembly of the mitotic motor Kinesin-5 into bipolar tetramers.

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Jessica Scholey, PhD, MSc